Publishing on Nygen Database

Get guidance on preparing and publishing your dataset on Nygen Database, including annotations, metadata, and project details for seamless sharing and accessibility.

If you would like to publish your dataset on Nygen Database, please get in touch with our support team!

We will guide you on steps to prepare the dataset and publish the entry on Nygen Database.

Preparing your dataset

Here are some steps you can complete to help prepare your dataset for publishing:

Annotation and metadata

Make sure that your dataset has been annotated with cell types and include any metadata details on the dataset.

Required details include:

• Organ - The organ or tissue the samples in the dataset was taken from.

• Disease - The disease or treatment conditions of the samples in the dataset. This can also be healthy or just normal.

Organism - The species of the samples in the dataset

• Cells - The number of cells in the dataset

Project description

Prepare details on the study this dataset was for this can a manuscript or a published paper:

• Title - The title of the study or project, this can also be the title of your research paper.

• Summary - A short abstract or summary of the paper

• DOI - doi link to the paper or preprint

• Publication year - Publication year for the paper, this can also be updated later for preprints.

💡 We can also host the dataset and create a link to the dataset without making the entry public on Nygen Database temporarily for manuscripts. This way you can add the link on your manuscript, then the dataset will be interactive and accessible for reviewers or anyone with access to the link.

Please contact our support if you would like to know more.

Yi Su

Bioinfomatician