Platform Overview

Nygen is a cloud-based platform designed for comprehensive single-cell data analysis. The platform enables researchers to efficiently analyze, explore, and publish large-scale genomic datasets through a secure cloud infrastructure.

Supported Data Types

Supported Modalities

  • Single-cell RNA Sequencing (scRNA-seq) analysis
  • CITE-seq for surface protein quantification
  • Spatial transcriptomics visualization
  • BCR/TCR sequencing with clonotype analysis

Technology Compatibility

The platform is technology-agnostic, supporting data from multiple commercial droplet and plate-based methods.

Core Platform Features

Data Management

  • Advanced dataset merging and subsetting capabilities
  • Comprehensive metadata integration
  • Flexible data organization system
  • Version tracking and management

Infrastructure and Security

  • Deployment across 20 AWS global regions
  • Strict data residency enforcement
  • ISO 27001-ready infrastructure
  • GDPR-compliant data handling
    • Processing of count matrices only
    • No raw sequencing data storage

Cloud Implementation

  • Browser-based interface
  • No local installation required
  • User-selected server location
  • Scalable computation resources, all analysis executed immediately and no job queuing
  • Real-time collaboration capabilities

Parashar Dhapola

PhD, CEO

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