Unlock
The Next Frontier
of Single-cell Research

single-cell RNA-seq data analysis with Nygen
Designed for the bench scientist. Spend less time wrestling with data and more time making discoveries.
Built for bench scientists. Focus on discoveries; not wrestling with data.
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Join 1500+ researchers
analyzing with Nygen
single-cell RNA-seq data analysis with Nygen
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Make sense
of your
single-cell data

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Intuitive single-cell analysis. No coding required.
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AI-powered cell auto-annotation, disease, drug discovery and literature insights.
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Browse millions of curated scRNA-Seq datasets and integrate directly into your analysis pipeline.
rapid, reproducible & Robust analytics
Intuitive single cell RNA-seq data analysis and exploration on Nygen Analytics

Nygen empowers single-cell data exploration-with confidence.

Intuitive Data Exploration

Self-optimizing analytics engine designed to simplyfy scRNA-seq and multi-omics data analyses. Drag-and-drop features utilizing scientifically validated workflows.

Advanced AI-Enabled Features

Go beyond cell annotation. Designed for deep cell characterization. Perform in-depth disease impact analyses, uncover literature based evidence and identify biomarkers with ease.
Intuitive single cell RNA-seq data analysis and exploration on Nygen Analytics

Collaborative Bioinformatics Analysis

Host, collaborate, and publish your single cell RNA-seq and multi-omics data. Enables bench scientists and bioinformaticians to collaborate directly within the analysis environment.
Nygen is a Powerful and intuitive scRNA-seq analysis platform

Intuitively designed for discovery, revealing biological insights.

Swiftly navigate scRNA-seq and multi-omics data with unmatched clarity and ease.

Publication-ready, peer‑reviewable figures, tables, and methods
Rapid and reproducible single‑cell analysis data
Industry leading data security and compliance (GDPR, ISO‑27001, and SOC 2)
Nygen Analytics holds ISO 27001, SOC 02 certifications and is fully GDPR compliant

Trusted by leading experimental researchers worldwide

"Nygen's user-friendly interface allows us to explore data rapidly, even without prior coding knowledge. Additionally, its online storage capacity facilitates seamless collaboration, enabling us to share results effortlessly."
Jonathan Baldan, PhD
Postdoctoral Researcher,
Vrije Universiteit, Belgium
"One of the standout features of Nygen is its ability to integrate other single-cell datasets from the literature into our own analysis. This capability has streamlined our workflow by eliminating the need for complicated procedures."
Mattias Magnusson, PhD
Associate Professor
Lund University, Sweden
"Before using Nygen I thought that I needed some knowledge of programming in order to effectively analyse single cell data. However, with Nygen this isn’t necessary and I can easily explore my data in lots of detail and produce attractive figures."
Francis Hopkins
Post Doctoral Researcher
Linköping University, Sweden
"Nygen is enabling me, as a non-bioinformatically trained scientist, to better understand and interact with my single-cell data."
Macarena Oporto Espuelas, PhD
Senior Clinical Research Fellow
University College London, UK
"I enjoyed analyzing public single-cell RNA data using R or Python, but they were difficult for me. (...) With Nygen, I could analyze several data without any stress. It was so amazing and helpful."
Masaki Ishikawa, PhD
Researcher
University of Pennsylvania, USA

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Always Accessible.

Explore Nygen with our free tier. Free forever.
Unlock it's full potential designed for discovery with transparent pricing.

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solutions

Services Built for Discovery

Accelerate Discovery with Compresenive Bioinformatics Services from Nygen
Accelerate Discovery

Comprehensive Single Cell Bioinformatics

The industry validated analytics platform with dedicated single‑cell bioinformaticians to accelerate discovery.
Efficiently publish datasets via interactive browsers to enhance visibility, foster collaboration, and accelerate scientific discovery⁠.
Deep Data Insights

CyteType®: For Deep Cell Characterization

CyteType® is a our multi-LLM agentic cell characterization package for designed for automated cell annotation and beyond.
Cell atlases speed drug discovery by revealing cell diversity and function, accelerating target validation, improving trials, and inspiring new therapies.
Drug Discovery

Cell Atlases: An Engine For Drug Discovery

Cell atlases speed drug discovery by revealing cell diversity and function, accelerating target validation, improving trials, and inspiring new therapies.
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Ready to transform your single‑cell data into decisions?